HRCHY-CytoCommunity

Getting Started:

Installation

Tutorials

Tutorial 1 Run HRCHY-CytoCommunity on 18_Cell_TNBC_MIBI-TOF
Tutorial 3: Run HRCHY-CytoCommunity on 18 Cell MouseSpleen CODEX
Tutorial 2 Run HRCHY-CytoCommunity on 18 Mouse hypothalamic preoptic region MERFISH dataset
Tutorial 4: automatically identify stable cluster resolution module of HRCHY-CytoCommunity on Visium BC dataset

User Guide:

User guide

API:

HRCHY-CytoCommunity API Reference

HRCHY-CytoCommunity

hrchy_cytocommunity.models.dataset
View page source

hrchy_cytocommunity.models.dataset

Classes

SpatialOmicsImageDataset(root[, transform, ...])

Spatial omics dataset loader for HRCHY-CytoCommunity.

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